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PRALINE sequence alignment results for job Example_5

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The PRALINE alignment process was completed in 3273.0 seconds.

Alignment score = 218516.00
Alignment score per aligned residue pair = 8.73
Sequence identities = 4852
Percent sequence identity = 0.19
Number of sequences = 12
Alignment length = 486
Number of residues = 4896
Number of gaps = 936



Download the final alignment [p450.msf]
Download PRALINE raw output file [results.out]
Download PSI-BLAST output files

 

Results colour-coded for amino acid conservation

The current colourscheme of the alignment is for amino acid conservation.

       

The conservation scoring is performed by PRALINE. The scoring scheme works from 0 for the least conserved alignment position, up to 10 for the most conserved alignment position.
The colour assignments are:

Unconserved 0 1 2 3 4 5 6 7 8 9 10 Conserved


  . . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50
1n97a - - M K R - L S L R E A - - - - - W P Y L K D L Q Q D - P L A V L L A W G R A H P R L F L - - - - -
1jpza - - - - T I K E M P Q P K T F G E L K N L P L L N T D K P V Q A L M K I A D E L G E I F K - - - - -
1e9xa - - M S A V A L P R V S G G H D E H G H L E E F R T D - P I G L M Q R V R D E C G D V G T - - - - -
1dt6a - - - - - - - - P P G P T P F P I I G N I L Q I D A K D I S K S L T K F S E C Y G P V F T - - - - -
1gwia - - - - - - - - - - - - - - - - - - A R I P L D P F V T D L D G E S A R L R A A G P L A A - - - - -
1jipa - - - - - - - - - - - - - - - T T V P D L E S D S F H V D W Y R T Y A E L R E T A P V T P - - - - -
1n40a - - - - - - - - - - - - - - A T V L L E V P F S A R G D R I P D A V A E L R T R E P I R K - - - - -
1jfba - - - - - - - - - - - - - - A P S F P - - F S R A S G P E P P A E F A K L R A T N P V S Q - - - - -
1cpt - - - M D A R A T I P E H I A R T V I L P Q G Y A D D E V I Y P A F K W L R D E Q P L A M - - - - -
1qmqa A N L A P L P P H V P E H L V F D F D M Y N P S N L S A G V Q E A W A V L Q E S N V P D L - - - - -
1lfka - - - - - - - - - - - - - - - - - - - - - - - - - - - - D P R P L H I R R Q G L D P A D E L L A A G
1io7a - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M Y D W F S E M R K K D P V Y Y - - - - -
Consistency0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 1 2 2 1 3 2 2 2 2 2 2 1 2 4 3 3 4 3 5 3 4 6 4 3 4 5 6 3 3 0 0 0 0 0
 
  . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100
1n97a - - P L - P R F P L A L I F D P E G V E G A L L - A E G T T K A T F Q Y R A L S R L T - G R G L L T
1jpza - - F E A P G R V T R Y L S S Q R L I K E A C D E S R F D K N L S Q A L K F V R D F A - G D G L F T
1e9xa - - F Q L A G K Q V V L L S G S H A N E F F F R A G D D D L D Q A K A Y P F M T P I F - G E G V V F
1dt6a - - V Y L G M K P T V V L H G Y E A V K E A L V D L G E E F A G R G S V P I L E K V S K G L G I A F
1gwia - V E L P G G V P V W A V T H H A E A K A L L T D P R L V K D I N V W G A W R R G E I P - - A D W P
1jipa - V R F L - G Q D A W L V T G Y D E A K A A L S D L R L S S D P K K K Y P G V E V E F P A Y L G F P
1n40a - V R T I T G A E A W L V S S Y A L C T Q V L E D R R F S M K E T A A A G A P R - - - - - - - - - -
1jfba - V K L F D G S L A W L V T K H K D V C F V A T S E K L S K V R T R Q G F P E L - - - - - - - S A S
1cpt - A H I E G Y D P M W I A T K H A D V M Q I G K Q P G L F S N A E G S E I L Y D Q N N E A F M R S I
1qmqa - V W T R C N G G H W I A T R G Q L I R E A Y E D Y R H F S S E C P F - - - - - - - - - - - - - I P
1lfka A L T R V T A E T H W M A T A H A V V R Q V M G D H Q Q F S T R R R W - - - - - - - - - - - - - - -
1io7a - - - - - - D G N I W Q V F S Y R Y T K E V L N N F S K F S S D L T G Y H E R L E D L - - - R N G K
Consistency0 2 2 3 2 2 4 3 3 4 5 5 6 5 4 4 4 3 5 5 4 6 4 3 4 2 4 3 3 4 4 3 3 3 3 2 1 1 2 2 1 1 1 0 1 0 1 1 2 2
 
  . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150
1n97a - - D W G E S W K E A R K A - L K D P F L P K N V R G Y R E - A M E E E A R A F F G E W R - - - - G
1jpza S W T H E K N W K K A H N I - L L P S F S Q Q A M K G Y H A - M M V D I A V Q L V Q K W E R L N A D
1e9xa - - - D A S P E R R K E M L - H N A A L R G E Q M K G H A A - T I E D Q V R R M I A D W G E - - - A
1dt6a - - S N A K T W K E M R R F S L M T L R N F G M G K R S I E D R I Q E E A R C L V E E L R K - T N A
1gwia - - L I G L A N P G R S M L T V D G A E H R R L R T L V A Q A L T V R R V E H M R G R I T E L T - D
1jipa - - E D V R N Y F A T N M G T S D P P T H T R L R K L V S Q E F T V R R V E A M R P R V E Q I T - A
1n40a - - L N A L T V P P E V V N N M G N I A D A G L R K A V M K A I T P K - A P G L E Q F L R D T A - N
1jfba - - G K Q A A K A K P T F V D M D P P E H M H Q R S M V E P T F T P E A V K N L Q P Y I Q R T V - D
1cpt - - S G G C P H V I D S L T S M D P P T H T A Y R G L T L N W F Q P A S I R K L E E N I R R I A - Q
1qmqa - - R E A G E A Y D F I P T S M D P P E Q R Q F R A L A N Q V V G M P V V D K L E N R I Q E L A - C
1lfka - - - - - D P E L V G N L M D Y D P P E H T R L R R K L T P G F T L R K M Q R M A P Y I E Q I V - N
1io7a - - I R F D I P T R Y T M L T S D P P L H D E L R S M S A D I F S P Q K L Q T L E T F I R E T T - R
Consistency0 0 2 2 3 3 3 2 3 3 2 3 4 4 3 4 4 5 5 3 4 3 4 4 5 5 3 4 3 4 1 4 4 4 4 3 6 4 3 7 4 3 3 5 5 5 3 3 0 3
 
  . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200
1n97a E E R D L D H E M L A L - - S L R L L G R A L F G K P L S P S - - - L A E H A L K A L D R I M A - -
1jpza E H I E V P E D M T R L - - T L D T I G L C G F N Y R F N S F Y R D Q P H P F I T S M V R A L D E A
1e9xa G E I D L L D F F A E L - - T I Y T S S A C L I G K K F R D Q - - - L D G R F A K L Y H E L E R G T
1dt6a S P C D P T F I L G C A - - P C N V I C S V I F H N R F D Y - - - - K D E E F L K L M E S L H E N V
1gwia R L L D E L P A D G G - - - V V D L K A A F A Y P L P M Y V - - - - - V A D L M G I E E A R L P R L
1jipa E L L D E V G D S G V - - - - V D I V D R F A H P L P I K V - - - - - I C E L L G V D E K Y R G E F
1n40a S L L D N L I T E G A - - - P A D L R N D F A D P L A T A L - - - - - H C K V L G I P Q E D G P K L
1jfba D L L E Q M K Q K G C A N G P V D L V K E F A L P V P S Y I - - - - - I Y T L L G V P F N D L E Y L
1cpt A S V Q R L L D F D G - - - E C D F M T D C A L Y Y P L H V - - - - - V M T A L G V P E D D E P L M
1qmqa S L I E S - L R P Q G - - - Q C N F T E D Y A E P F P I R I - - - - - F M L L A G L P E E D I P H L
1lfka D R L D E M E R A G S - - - P A D L I A F V A D K V P G A V - - - - - L C E L V G V P R D D R D M F
1io7a S L L D S I D P R E - - - - - D D I V K K L A V P L P I I V - - - - - I S K I L G L P I E D K E K F
Consistency5 4 6 7 3 4 2 3 3 4 2 0 0 0 2 4 6 5 5 3 3 4 6 3 4 4 5 4 3 4 0 0 0 0 0 3 2 3 5 7 5 6 4 4 5 3 3 4 2 4
 
  . . . . . . . . . 210 . . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250
1n97a - - - - - - - - - - - - - - - - - - - Q T R S P L A L L D L A A E A R F R K D R - - - - - - - - G A
1jpza M N K L Q R A N P D D P A Y D E N K R Q F Q E D I K V M N D L V D K I I A D R K A S - - - - - Q S D
1e9xa D - - - P L A Y V D P Y L P I E S F R R R D E A R N G L V A L V A D I M N G R I A N P P T D K S D R
1dt6a E - - - - L L G T P L D Y F P G I H K T L L K N A D Y I K N F I M E K V K E H Q K L L - D V N N P R
1gwia K - - - V L F E K F F S T - Q T P P E E V V A T L T E L A S I M T D T V A A K R A A - - - - - P G D
1jipa G - - - R W S S E I L V M D P E R A E Q R G Q A A R E V V N F I L D L V E R R R T E - - - - - P G D
1n40a F - - - R S L S I A F M S S A D P I P A A K I N W D R D I E Y M A G I L E N P N - - - - - - - I T T
1jfba T - - - Q Q N A I R T N G - S S T A R E A S A A N Q E L L D Y L A I L V E Q R L V E - - - - - P K D
1cpt L - - - K L T Q D F F G - - V E A A R R F H E T I A T F Y D Y F N G F T V D R R S C - - - - - P K D
1qmqa K - - - Y L T D Q M T R - - P D G S M T F A E A K E A L Y D Y L I P I I E Q R R Q K - - - - - P G T
1lfka M - - - K L C H G H L D A - S L S Q K R R A A L G D K F S R Y L L A M I A R E R K E - - - - - P G E
1io7a K - - - E W S D L V A F R - L G K P G E I F E L G K K Y L E L I G Y V - - K D H L N - - - - - S G T
Consistency2 0 0 0 2 3 3 3 2 2 3 2 1 0 3 3 2 2 3 5 3 3 5 3 3 4 3 5 3 4 5 6 3 3 5 5 3 4 5 5 3 2 0 0 0 0 0 4 4 4
 
  . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280 . . . . . . . . . 290 . . . . . . . . . 300
1n97a L Y R E A E A L I V H - P P L S H - L P R E R A L S E A V T L L V A G H E T V A S A L T W S F L L L
1jpza D L L T H M L N G K D P E T G E P - L D D E N I R Y Q I I T F L I A G H E T T S G L L S F A L Y F L
1e9xa D M L D V L I A V K A - E T G T P R F S A D E I T G M F I S M M F A G H H T S S G T A S W T L I E L
1dt6a D F I D C F L I K M E Q E N N L E - F T L E S L V I A V S D L F G A G T E T T S T T L R Y S L L L L
1gwia D L T S A L I Q A S E - N G - - D H L T D A E I V S T L Q L M V A A G H E T T I S L I V N A V V N L
1jipa D L L S A L I R V Q D - D D - D G R L S A D E L T S I A L V L L L A G F E S S V S L I G I G T Y L L
1n40a G L M G E L S R L R K - D P A Y S H V S D E L F A T I G V T F F G A G V I S T G S F L T T A L I S L
1jfba D I I S K L C T E Q V - K P - - G N I D K S D A V Q I A F L L L V A G N A T M V N M I A L G V A T L
1cpt D V M S L L A N S K L - D G - - N Y I D D K Y I N A Y Y V A I A T A G H D T T S S S S G G A I I G L
1qmqa D A I S I V A N G Q V - N G - - R P I T S D E A K R M C G L L L V G G L D T V V N F L S F S M E F L
1lfka G M I G A V V A E Y G - D - - - - D A T D E E L R G F C V Q V M L A G D D N I S G M I G L G V L A M
1io7a E V V S R V V N S N - - - - - - - - L S D I E K L G Y I I L L L I A G N E T T T N L I S N S V I D F
Consistency5 5 6 5 3 6 5 4 3 4 2 0 4 2 0 0 2 1 6 5 4 5 4 5 4 3 3 3 4 4 6 6 4 9 * 3 5 7 5 5 5 4 6 4 3 6 6 5 3 8
 
  . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350
1n97a S H R P D W Q K R V A E S E E A A L - - - - - - - - - - - - - - - - - - A A F Q E A L R L Y P P A W
1jpza V K N P H V L Q K A A E E A A R V L V D P V P - S Y K Q V K Q L K Y V G M V L N E A L R L W P T A P
1e9xa M R H R D A Y A A V I D E L D E L Y G D G R S V S F H A L R Q I P Q L E N V L K E T L R L H P P L I
1dt6a L K H P E V A A R V Q E E I E R V I G R H R S P C M Q D R S R M P Y T D A V I H E I Q R F I D L L P
1gwia S T H P E Q R A L V L S G E A E W - - - - - - - - - - - - - - - - - - S A V V E E T L R F S T P T S
1jipa L T H P D Q L A L V R R D P S A L - - - - - - - - - - - - - - - - - - P N A V E E I L R Y I A P P E
1n40a I Q R P Q L R N L L H E K P E L I - - - - - - - - - - - - - - - - - - P A G V E E L L R I N L S F A
1jfba A Q H P D Q L A Q L K A N P S L A - - - - - - - - - - - - - - - - - - P Q F V E E L C R Y H T A S A
1cpt S R N P E Q L A L A K S D P A L I - - - - - - - - - - - - - - - - - - P R L V D E A V R W T A P V K
1qmqa A K S P E H R Q E L I E R P E R I - - - - - - - - - - - - - - - - - - P A A C E E L L R R F S L V -
1lfka L R H P E Q I D A F R G D E Q S A - - - - - - - - - - - - - - - - - - Q R A V D E L I R Y L T V P Y
1io7a T R F N L W - - Q R I R E E N L Y - - - - - - - - - - - - - - - - - - L K A I E E A L R Y S P P V M
Consistency5 5 5 7 5 3 3 4 4 5 3 5 5 4 5 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 4 5 6 6 * 5 6 * 4 3 4 4 4 2
 
  . . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400
1n97a - I L T R R L E R P L L L - G E D R L P P G T T L V L S P Y V T Q R L H - - F P D G - E A F R P E R
1jpza - A F S L Y A K E D T V L G G E Y P L E K G D E L M V L I P Q L H R D K T I W G D D V E E F R P E R
1e9xa - I L M R V A K G E F E V - Q G H R I H E G D L V A A S P A I S N R I P E D F P D P - H D F V P A R
1dt6a T N L P H A V T R D V R F - R N Y F I P K G T D I I T S L T S V L H D E K A F P N P - K V F D P G H
1gwia H V L I R F A A E D V P V - G D R V I P A G D A L I V S Y G A L G R D E R A H G P T A D R F D L T R
1jipa T T T - R F A A E E V E I - G G V A I P Q Y S T V L V A N G A A N R D P K Q F - P D P H R F D V T R
1n40a D G L P R L A T A D I Q V - G D V L V R K G E L V L V L L E G A N F D P E H F - P N P G S I E L D R
1jfba L A I K R T A K E D V M I - G D K L V R A N E G I I A S N Q S A N R D E E V F - E N P D E F N M N R
1cpt S F M - R T A L A D T E V - R G Q N I K R G D R I M L S Y P S A N R D E E V F - S N P D E F D I T R
1qmqa A D G - R I L T S D Y E F - H G V Q L K K G D Q I L L P Q M L S G L D E R E N - A A P M H V D F S R
1lfka S P T P R I A R E D L T L - A G Q E I K K G D S V I C S L P A A N R D P A L A - P D V D R L D V T R
1io7a R T V - R K T K E R V K L - G D Q T I E E G E Y V R V W I A S A N R D E E V F - H D G E K F I P D R
Consistency2 3 5 1 7 3 6 4 5 6 5 4 6 0 5 5 3 3 8 4 5 7 6 3 8 6 5 5 3 3 4 6 5 6 7 5 4 3 5 0 4 4 2 4 4 7 4 4 4 8
 
  . . . . . . . . . 410 . . . . . . . . . 420 . . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450
1n97a F L E E R G - - - T P S G R Y F P F G L G Q R L C L G R D F A L L E G P I V L R A F F R R F R L - -
1jpza F E N P S A - - - I P Q H A F K P F G N G Q R A C I G Q Q F A L H E A T L V L G M M L K H F D F - -
1e9xa Y E Q P R Q E D L L N R W T W I P F G A G R H R C V G A A F A I M Q I K A I F S V L L R E Y E F E M
1dt6a F L D E S G N F K K S D Y - F M P F S A G K R M C V G E G L A R M E L F L F L T S I L Q N F K L - -
1gwia T S - G N R - - - - - - - - H I S F G H G P H V C P G A A L S R M E A G V A L P A L Y A R F P H L D
1jipa D T - - R G - - - - - - - - H L S F G Q G I H F C M G R P L A K L E G E V A L R A L F G R F P A L S
1n40a P N - P T S - - - - - - - - H L A F G R G Q H F C P G S A L G R R H A Q I G I E A L L K K M P G V D
1jfba K W P P Q D - - - - - - - - P L G F G F G D H R C I A E H L A K A E L T T V F S T L Y Q K F P D L K
1cpt F P - - N R - - - - - - - - H L G F G W G A H M C L G Q H L A K L E M K I F F E E L L P K L K S V E
1qmqa Q K - - V S - - - - - - - - H T T F G H G S H L C L G Q H L A R R E I I V T L K E W L T R I P D F S
1lfka E P - - I P - - - - - - - - H V A F G H G V H H C L G A A L A R L E L R T V F T E L W R R F P A L R
1io7a N P - - N P - - - - - - - - H L S F G S G I H L C L G A P L A R L E A R I A I E E F S K R F R H I E
Consistency3 3 0 1 4 3 0 0 0 0 0 0 0 0 5 5 4 * 9 3 * 3 7 4 * 5 9 5 3 7 8 5 5 8 4 3 6 4 6 4 5 6 5 4 6 7 4 3 3 2
 
  . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . .
1n97a - - D P L P F P R V L A Q V T L R P E G G L P A R P R E - - - - - - - -
1jpza E D H T N Y E L D I K E T L T L K P E G F - V V K A K S K K I P L G G I
1e9xa A Q P P E S Y R N D H S K M V V Q L A Q P A C V R Y R R R T - - - - - -
1dt6a - Q S L V E P K D L D I T A V V N G F V S V P P S Y Q L C F I P I H H -
1gwia L A V P A A E L R N K P V V T Q N D L F E L P V R L A H H - - - - - - -
1jipa L G I D A D D V V W R R S L L L R G I D H L P V R L D G - - - - - - - -
1n40a L A V P I D Q L V W R T R F Q R R I P E R L P V L W - - - - - - - - - -
1jfba V A V P L G K I N Y T P L N R D V G I V D L P V I F - - - - - - - - - -
1cpt L S - - - G P P R L V A T N F V G G P K N V P I R F T K A - - - - - - -
1qmqa I A - - P G A Q I Q H K S G I V S G V Q A L P L V W D P A T T K A V - -
1lfka L A D P A Q D T E F R L T T P A Y G L T E L M V A W - - - - - - - - - -
1io7a I L - - - - D T E K V P N E V L N G Y K R L V V R L K S - - - - - - - -
Consistency4 4 1 3 2 3 3 3 3 2 3 3 4 3 4 4 4 4 3 3 3 6 5 7 4 3 2 1 0 0 0 0 0 0 0 0
 

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