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Secondary structure files for file msl_ref7.fasta

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PSIPred_2.5 (Jones, 1999)

Filename Type Description
MSCL_ECOLI-msl_ref7.psipred output   Contains residues, predicted types and reliabilities
MSCL_ERWCA-msl_ref7.psipred output   Contains residues, predicted types and reliabilities
MSCL_HAEIN-msl_ref7.psipred output   Contains residues, predicted types and reliabilities
MSCL_PSEFL-msl_ref7.psipred output   Contains residues, predicted types and reliabilities
MSCL_Q9RH75-msl_ref7.psipred output   Contains residues, predicted types and reliabilities
MSCL_BACSU-msl_ref7.psipred output   Contains residues, predicted types and reliabilities
MSCL_CLOPE-msl_ref7.psipred output   Contains residues, predicted types and reliabilities
MSCL_CLOHI-msl_ref7.psipred output   Contains residues, predicted types and reliabilities
MSCL_SYNY3-msl_ref7.psipred output   Contains residues, predicted types and reliabilities
MSCL_STAAU-msl_ref7.psipred output   Contains residues, predicted types and reliabilities
MSCL_MYCTU-msl_ref7.psipred output   Contains residues, predicted types and reliabilities
No prediction for 1msla N/A PSIPRED prediction was skipped due to the presence of DSSP structural information (see table below)
MSCL_MYCLE-msl_ref7.psipred output   Contains residues, predicted types and reliabilities
MSCL_Q9RRR4-msl_ref7.psipred output   Contains residues, predicted types and reliabilities
 

DSSP (Kabsch and Sander, 1983)

Filename Type Description
No DSSP file available for MSCL_ECOLI N/A DSSP or PDB file not found. This is name based, so check the name of your sequence if you know there is a PDB entry
No DSSP file available for MSCL_ERWCA N/A DSSP or PDB file not found. This is name based, so check the name of your sequence if you know there is a PDB entry
No DSSP file available for MSCL_HAEIN N/A DSSP or PDB file not found. This is name based, so check the name of your sequence if you know there is a PDB entry
No DSSP file available for MSCL_PSEFL N/A DSSP or PDB file not found. This is name based, so check the name of your sequence if you know there is a PDB entry
No DSSP file available for MSCL_Q9RH75 N/A DSSP or PDB file not found. This is name based, so check the name of your sequence if you know there is a PDB entry
No DSSP file available for MSCL_BACSU N/A DSSP or PDB file not found. This is name based, so check the name of your sequence if you know there is a PDB entry
No DSSP file available for MSCL_CLOPE N/A DSSP or PDB file not found. This is name based, so check the name of your sequence if you know there is a PDB entry
No DSSP file available for MSCL_CLOHI N/A DSSP or PDB file not found. This is name based, so check the name of your sequence if you know there is a PDB entry
No DSSP file available for MSCL_SYNY3 N/A DSSP or PDB file not found. This is name based, so check the name of your sequence if you know there is a PDB entry
No DSSP file available for MSCL_STAAU N/A DSSP or PDB file not found. This is name based, so check the name of your sequence if you know there is a PDB entry
No DSSP file available for MSCL_MYCTU N/A DSSP or PDB file not found. This is name based, so check the name of your sequence if you know there is a PDB entry
1msl.dssp for sequence 1msla input Contains structural definitions from the corresponding PDB file
No DSSP file available for MSCL_MYCLE N/A DSSP or PDB file not found. This is name based, so check the name of your sequence if you know there is a PDB entry
No DSSP file available for MSCL_Q9RRR4 N/A DSSP or PDB file not found. This is name based, so check the name of your sequence if you know there is a PDB entry


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